rs61280821 chr1:40654103 C>T

Sequence
taccacggacagcggctggcgact[C/T]gctcccagtccctcccccgcctgc
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
REST_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
REST_HUMAN 1.42 1.42 1.004.0·10-3 1.38 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous Artery_Tibial Cells_Cultured_fibroblasts Colon_Transverse Esophagus_Muscularis Muscle_Skeletal Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Thyroid Whole_Blood

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