rs6128146 chr20:57749595 C>G
- Sequence
gggggtactggagtgtctcagtgt[C/G]agaggcgttggaaccagagcgact
- ASB in cell types
- HUVEC-C (HUVEC, umbilical vein endothelial cells) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN TF65_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.30 | -0.73 | 2.00 | n/a | No Hit | |||
| TF65_HUMAN | 2.60 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (geographic atrophy), fasting blood glucose, fasting insulin, hdl cholesterol change with statins, homa-ir, ldl cholesterol