rs6129779 chr20:41247927 T>C
- Sequence
cctacctcaactctgcctaggcca[T/C]tcccctgcttcaagctcttacaga
- ASB in cell types
- ARP-1(Plasma cell myeloma)
- ASB for transcription factors
- IKZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | -1.84 | 2.30 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP body mass index (bmi), fasting blood glucose, infant head circumference, ldl cholesterol, total cholesterol, triglycerides
GTEx eQTL Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Cortex, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Lung, Pancreas, Pituitary, Stomach