rs6135817 chr20:1734802 C>T
- Sequence
tttgaaaaggaaattctaaaatta[C/T]gggaaactgctggacgaaactgag
- ASB in cell types
- GM12892 (female B-cells lymphoblastoid cell line) neural cell GM12890 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- STAG1_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 0.64 | 2.21 | 1.00 | n/a | n/a | |||
| RAD21_HUMAN | 0.11 | 2.54 | 1.33 | n/a | n/a |
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