rs6136614 chr20:19077526 T>C
- Sequence
ggcatctgttgactttctgcactc[T/C]aggtggagtgttccacttccctct
- ASB in cell types
- MS-1 (Small cell lung carcinoma) monocyte-derived dendritic cells CTV-1 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- CTCF_HUMAN SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.23 | -0.29 | 1.08 | 0.70 | Weak Discordant | |||
| SPI1_HUMAN | 1.50 | 0.05 | 1.20 | n/a | No Hit |
Items per page:
1 – 2 of 2
Motif analysis
