rs6136847 chr20:19815742 G>A
- Sequence
tgccgttgacttcctctggagccc[G/A]ctacaccacagagtcctgtgggaa
- ASB in cell types
- glioblastoma patient-derived cell model foreskin keratinocyte monocyte-derived dendritic cells HS-ES-2M (Epithelioid sarcoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.11 | -1.22 | 1.25 | 0.13 | Weak Discordant |
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Motif analysis
