rs6137821 chr20:23087162 C>T

Sequence
aatcgaagcccgggcaggccctcc[C/T]gcgacaccgcgactcggcaaaagc
ASB in cell types
MDM(monocyte derived macrophages) CD14+ monocytes
ASB for transcription factors
STAT1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN -4.84 3.26 1.002.7·10-5 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP cystatin c in serum,  estimated total intracranial volume (excluding patients with neuropsychiatric disorders)
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Tibial,  Brain_Cerebellum,  Lung,  Muscle_Skeletal,  Stomach,  Whole_Blood

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