rs6137978 chr20:2419793 G>C
- Sequence
ttaaataaatatatggtgacctat[G/C]ttttcttttaggtagttatcagct
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN TLE3_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 2.01 | -0.14 | 1.47 | n/a | No Hit | |||
| TLE3_HUMAN | 2.36 | -4.19 | 1.50 | n/a | n/a | |||
| ANDR_HUMAN | 1.16 | -0.45 | 1.11 | n/a | No Hit |
Items per page:
1 – 3 of 3