rs6139176 chr20:3658948 A>G
- Sequence
ctcaaaaacaaacagacaaaaaaa[A/G]tcaatgctcttagcatctgctggg
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- CREB1_HUMAN FOXA2_HUMAN NFYC_HUMAN SKI_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CREB1_HUMAN | 1.41 | -0.27 | 1.36 | n/a | No Hit | |||
| FOXA2_HUMAN | 1.79 | -1.78 | 1.25 | n/a | No Hit | |||
| NFYC_HUMAN | 2.13 | -1.89 | 1.00 | n/a | No Hit | |||
| SKI_HUMAN | 2.73 | -2.47 | 1.00 | n/a | n/a | |||
| P66A_HUMAN | 2.54 | -2.19 | 1.00 | n/a | n/a |
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