rs6141429 chr20:33897754 A>G
- Sequence
ctcactgcacaactcccagggggc[A/G]ccattcccagttcagcgatcaacc
- ASB in cell types
- glioblastoma patient-derived cell model
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -1.09 | 2.60 | 1.88 | 0.37 | Weak Concordant |
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Motif analysis
