rs61527589 chr1:16608312 C>T
- Sequence
agtaaaatcacttctacctgacca[C/T]ggcactgcagctcatgggcagcac
- ASB in cell types
- HepG2 (hepatoblastoma) MCF7 (Invasive ductal breast carcinoma) VCaP (prostate carcinoma) MCF7 WS8 cells
- ASB for transcription factors
- ESR1_HUMAN FOXA1_HUMAN MLX_HUMAN ZN792_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 1.53 | 0.43 | 3.03 | n/a | No Hit | |||
| FOXA1_HUMAN | 1.73 | 0.64 | 2.92 | n/a | No Hit | |||
| MLX_HUMAN | 3.26 | n/a | 1.50 | n/a | n/a | |||
| ZN792_HUMAN | 3.59 | -3.73 | 1.00 | n/a | n/a | |||
| CEBPA_HUMAN | 3.05 | n/a | 1.50 | n/a | No Hit |
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