rs61537129 chr8:94895889 G>T
- Sequence
gagcccgctccgccggccttgcgc[G/T]gcgcgcccagggaaggcatttcca
- ASB in cell types
- BEAS-2B (bronchial epithelium) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ZN528_HUMAN GCR_HUMAN RBM25_HUMAN RBBP5_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN528_HUMAN | -1.72 | 2.17 | 1.50 | n/a | No Hit | |||
| GCR_HUMAN | 1.40 | 0.54 | 1.00 | n/a | No Hit | |||
| RBM25_HUMAN | -0.31 | 1.54 | 4.00 | n/a | n/a | |||
| RBBP5_HUMAN | n/a | 2.62 | 2.00 | n/a | n/a | |||
| ANDR_HUMAN | -0.74 | 2.25 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Heart_Atrial_Appendage, Lung, Nerve_Tibial, Ovary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid