rs61665022 chr12:120302559 C>G
- Sequence
gggaaaccggactgtgtgtttgtt[C/G]agctgttcacgttttgctgtggaa
- ASB in cell types
- HepG2 (hepatoblastoma) HAEC (human aortic endothelial cells) MOLM14 (Adult acute myeloid leukemia)
- ASB for transcription factors
- TGIF2_HUMAN ARI4B_HUMAN SP130_HUMAN CDK8_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TGIF2_HUMAN | 3.21 | -3.35 | 1.00 | n/a | n/a | |||
| ARI4B_HUMAN | 3.03 | -2.69 | 1.00 | n/a | n/a | |||
| SP130_HUMAN | 2.54 | -2.25 | 1.00 | n/a | n/a | |||
| CDK8_HUMAN | 2.68 | -1.59 | 2.00 | n/a | n/a | |||
| FOXA3_HUMAN | 3.02 | -5.02 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Liver, Lung, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach, Testis, Thyroid, Whole_Blood