rs61783827 chr1:28423514 A>G
- Sequence
gctaataataatgctccatgtagc[A/G]taagtatggttaaaaggttatata
- ASB in cell types
- HEK293 (embryonic kidney)
- ASB for transcription factors
- ZNF34_HUMAN ZN426_HUMAN ZN394_HUMAN ZN555_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZNF34_HUMAN | n/a | 3.89 | 2.00 | n/a | n/a | |||
| ZN426_HUMAN | n/a | 2.74 | 2.00 | n/a | n/a | |||
| ZN394_HUMAN | -5.17 | 2.99 | 2.00 | n/a | No Hit | |||
| ZN555_HUMAN | -1.98 | 2.78 | 2.00 | n/a | n/a | |||
| Z518A_HUMAN | -1.55 | 2.61 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Amygdala, Brain_Anterior_cingulate_cortex_BA24, Brain_Caudate_basal_ganglia, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Hippocampus, Brain_Hypothalamus, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Ovary, Pituitary, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Spleen, Testis, Thyroid, Uterus, Whole_Blood