rs61821370 chr1:197335923 T>G
- Sequence
aagcatgcctttctctctctgccc[T/G]ctattgccctctgatggcaatgtc
- ASB in cell types
- LUHMES (lund human mesencephalic cells) PANC1 (pancreatic ductal adenocarcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.33 | 0.76 | 2.20 | -4.09 | Concordant |
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Motif analysis
