rs618705 chr6:10528781 A>G

Sequence
accagaaccgtgaactgaagggac[A/G]gggaacagccagacgagagcttca
ASB in cell types
CD14+ monocytes 22RV1 (prostate carcinoma) GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
STAT1_HUMAN ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN 2.05 0.38 2.5·10-31.00 1.67 n/a No Hit
ANDR_HUMAN 2.67 n/a 0.031.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous,  Artery_Aorta,  Muscle_Skeletal,  Skin_Sun_Exposed_Lower_leg,  Thyroid,  Whole_Blood

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