rs61945844 chr12:120291728 C>T
- Sequence
cacaacctgctataatacaacttc[C/T]taaaacccttttctttagactttt
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) 22RV1 (prostate carcinoma) MDM(monocyte derived macrophages) primary B-CLL cells
- ASB for transcription factors
- CHD1_HUMAN RFX1_HUMAN SPI1_HUMAN Z512B_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CHD1_HUMAN | -2.14 | 2.49 | 1.00 | n/a | n/a | |||
| RFX1_HUMAN | -1.14 | 1.97 | 1.00 | n/a | No Hit | |||
| SPI1_HUMAN | 2.19 | n/a | 2.75 | n/a | No Hit | |||
| Z512B_HUMAN | -0.73 | 2.36 | 1.00 | n/a | n/a | |||
| NFIB_HUMAN | -2.17 | 2.52 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Cells_Cultured_fibroblasts, Colon_Transverse, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg