rs62055081 chr16:73057690 C>T
- Sequence
cgagcccccgggagcccctagtgt[C/T]cagggcagagtcccctctgggcgc
- ASB in cell types
- 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.74 | -4.97 | 2.00 | n/a | No Hit | |||
| CTCF_HUMAN | 0.49 | 1.22 | 1.12 | -0.66 | Weak Discordant |
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Motif analysis
