rs62141693 chr2:47176969 T>C

Sequence
cggcagagtcgcctgctttgcgct[T/C]ggctggagaaccttcctcttccac
ASB in cell types
HepG2 (hepatoblastoma) GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
TYY1_HUMAN FOXK2_HUMAN KMT2A_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TYY1_HUMAN 3.54 -0.69 2.0·10-50.97 2.00 n/a No Hit
FOXK2_HUMAN 2.83 0.29 4.4·10-31.00 1.75 n/a n/a
KMT2A_HUMAN -0.32 1.73 1.000.02 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Tibial

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