rs62166946 chr2:120223118 G>A
- Sequence
cgaatgccgggacgaccaggagga[G/A]gttcggagcggcgaagcggagagg
- ASB in cell types
- neural cell macrophages form periferal blood breast tumor CD14+ monocytes
- ASB for transcription factors
- SPI1_HUMAN ESR1_HUMAN STAT1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | n/a | 2.25 | 2.00 | 4.03 | Concordant | |||
| ESR1_HUMAN | 2.48 | n/a | 3.00 | n/a | No Hit | |||
| STAT1_HUMAN | 1.76 | -4.22 | 2.00 | n/a | No Hit |
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Motif analysis
