rs62171092 chr2:159133988 A>G
- Sequence
ttttgtagtatgcctttagatggc[A/G]gcatctctcgccataaaccatctt
- ASB in cell types
- GM12890 (Lymphoblastoid Cell Lines) GM18505 (female B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.63 | -2.58 | 1.00 | 0.37 | Weak Discordant |
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Motif analysis
