rs62193453 chr20:24407046 G>T
- Sequence
tctgcagaacacatgatctccctc[G/T]ggcgtctgcctgccagtcctgtcc
- ASB in cell types
- thoracic aorta 22RV1 (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | n/a | 3.14 | 1.17 | 3.62 | Concordant |
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Motif analysis
