rs62214331 chr21:45555013 C>T
- Sequence
gcccaggagcacgtccaggttatg[C/T]gtggggccgccctgtgcgcgcgcc
- ASB in cell types
- K562 (myelogenous leukemia) neural cell tibial nerve transverse colon
- ASB for transcription factors
- PF21A_HUMAN HDAC2_HUMAN SMC3_HUMAN HDAC1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PF21A_HUMAN | 2.51 | -2.33 | 1.00 | n/a | n/a | |||
| HDAC2_HUMAN | 2.79 | -2.41 | 1.00 | n/a | n/a | |||
| SMC3_HUMAN | 1.75 | -1.57 | 1.00 | n/a | n/a | |||
| HDAC1_HUMAN | 2.45 | -0.10 | 1.17 | n/a | n/a | |||
| KDM1A_HUMAN | 1.53 | -1.43 | 2.00 | n/a | n/a |
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