rs62266873 chr3:129249511 A>C
- Sequence
ctttccccactcccgctccggcgg[A/C]gctaaggttaacattagacgaggc
- ASB in cell types
- CD14+ monocytes BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- NELFE_HUMAN STAT1_HUMAN GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NELFE_HUMAN | 0.98 | 0.06 | 1.00 | n/a | n/a | |||
| STAT1_HUMAN | 2.07 | -0.10 | 3.00 | n/a | No Hit | |||
| GCR_HUMAN | 1.20 | 0.52 | 1.00 | n/a | No Hit |
Items per page:
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Cortex, Brain_Nucleus_accumbens_basal_ganglia, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood