ADASTRA v5.1.3
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rs62273904
chr3:156826787
T
>
C
Sequence
tgccgcttcaggaaagtcttagga[T/C]gtgaactcccgccttcacctgccc
ASB in cell types
HEK293T (embryonic kidney)
MS-1 (Small cell lung carcinoma)
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HEK293T (embryonic kidney)
-0.44
1.40
1.00
8.9·10
-3
2.00
MS-1 (Small cell lung carcinoma)
1.87
-1.49
9.9·10
-3
1.00
1.00
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Tibial
,
Brain_Caudate_basal_ganglia
,
Brain_Cerebellar_Hemisphere
,
Cells_Cultured_fibroblasts
,
Colon_Transverse
,
Esophagus_Mucosa
,
Pancreas
,
Skin_Sun_Exposed_Lower_leg
,
Thyroid
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale