rs62308866 chr4:87220480 A>G

Sequence
ttgcagccacgttaccacgctccc[A/G]gagccccggccgccctcagcggaa
ASB in cell types
K562 (myelogenous leukemia) HepG2 (hepatoblastoma) 22RV1 (prostate carcinoma)
ASB for transcription factors
TYY1_HUMAN ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TYY1_HUMAN 3.95 -0.82 1.5·10-51.00 1.67 n/a No Hit
ANDR_HUMAN 2.44 -0.24 8.6·10-41.00 1.67 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Tibial,  Brain_Cerebellum,  Cells_Cultured_fibroblasts,  Lung,  Skin_Sun_Exposed_Lower_leg,  Thyroid

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