rs62328642 chr4:155629427 C>G
- Sequence
aacaaggatgctggcacctccgct[C/G]catattgaatcaggttgacaggat
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) HUVEC-C (HUVEC, umbilical vein endothelial cells) iPS-derived dermal fibroblasts
- ASB for transcription factors
- RARA_HUMAN TF65_HUMAN IKZF2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RARA_HUMAN | -0.61 | 3.21 | 2.00 | n/a | No Hit | |||
| TF65_HUMAN | 1.53 | -0.82 | 3.00 | n/a | No Hit | |||
| IKZF2_HUMAN | -1.14 | 2.46 | 1.00 | n/a | n/a |
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