rs62398107 chr6:20875581 C>T
- Sequence
attgattccaggagagggcagcag[C/T]gctgtaagcatttaatttgggtat
- ASB in cell types
- A549 (lung carcinoma) 697 (B acute lymphoblastic leukemia with t(1;19)(q23;p13.3) E2A-PBX1 (TCF3-PBX1)) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- RAD21_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 1.00 | 0.73 | 1.11 | n/a | n/a | |||
| STAG1_HUMAN | 0.47 | 0.09 | 1.17 | n/a | n/a |
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