rs62409717 chr4:25088615 C>T
- Sequence
agcttctcccacgcaggcaggcgc[C/T]ggctgcaaatggaagtggggggca
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- EGR1_HUMAN NCOR1_HUMAN NRF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EGR1_HUMAN | 1.91 | -0.13 | 2.00 | n/a | No Hit | |||
| NCOR1_HUMAN | 1.47 | -3.96 | 2.00 | n/a | n/a | |||
| NRF1_HUMAN | 1.94 | -0.58 | 2.00 | 0.20 | Weak Discordant |
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Motif analysis
