rs62418435 chr6:91694447 T>C
- Sequence
ttttccagtacagtaaacaacttg[T/C]aacgcaccagttaatttgattgac
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN A2NVP9_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.32 | -0.10 | 1.55 | n/a | No Hit | |||
| ANDR_HUMAN | 1.63 | -0.50 | 1.44 | -0.96 | Weak Concordant | |||
| A2NVP9_HUMAN | 2.36 | -1.91 | 1.50 | n/a | n/a |
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Motif analysis
