rs62498569 chr7:144836229 C>T
- Sequence
ttctgctagctgtagtactgctgc[C/T]gggccctctgcactcagctttaac
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells lymphoblastoid cell line) primary B-CLL cells
- ASB for transcription factors
- ATF3_HUMAN RFOX2_HUMAN FOXK2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF3_HUMAN | 1.85 | -1.96 | 1.25 | n/a | No Hit | |||
| RFOX2_HUMAN | 1.85 | -0.93 | 1.75 | n/a | n/a | |||
| FOXK2_HUMAN | 2.04 | -0.18 | 1.33 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adrenal_Gland, Artery_Aorta, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Colon_Transverse, Esophagus_Muscularis, Heart_Left_Ventricle, Liver, Lung, Muscle_Skeletal, Pancreas, Spleen, Thyroid, Whole_Blood