rs62532740 chr8:100213666 G>A

Sequence
gtccccgccgggttttcccttggt[G/A]gctgttgcgggtagcagctccgtg
ASB in cell types
22RV1 (prostate carcinoma) breast tumor
ASB for transcription factors
ANDR_HUMAN ESR1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.39 -1.02 4.5·10-31.00 2.00 n/a No Hit
ESR1_HUMAN 2.17 -0.20 8.6·10-31.00 1.83 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Aorta,  Artery_Tibial,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Cells_Cultured_fibroblasts,  Lung,  Pituitary,  Thyroid

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