rs62569223 chr9:68999031 A>G
- Sequence
tcagtagtgccacacttcctctga[A/G]ggctccaggggaggatccttccct
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) GM12891 (male B- cells lymphoblastoid cell line)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN IKZF1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | -0.81 | 1.80 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | -0.29 | 2.01 | 1.00 | 0.90 | Weak Concordant | |||
| IKZF1_HUMAN | -0.46 | 2.26 | 1.17 | n/a | No Hit |
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Motif analysis
