rs6413917 chr1:201170736 G>A
- Sequence
gggcaagtgtattgcatcagggtt[G/A]aacagggtggcgccggccaaagag
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) breast tumor HepG2 (hepatoblastoma) HEK293 (embryonic kidney)
- ASB for transcription factors
- ESR1_HUMAN DAXX_HUMAN SRBP2_HUMAN CREB1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 1.06 | 3.85 | 3.00 | n/a | No Hit | |||
| DAXX_HUMAN | -1.46 | 2.26 | 2.00 | n/a | n/a | |||
| SRBP2_HUMAN | -0.98 | 2.23 | 3.00 | n/a | No Hit | |||
| CREB1_HUMAN | 0.18 | 1.18 | 1.17 | n/a | No Hit |
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