rs6416870 chr17:16971667 C>T
- Sequence
ttaaggaataaatcctgtggtctc[C/T]acaactcaaacaatctggtatttg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- SMCA5_HUMAN MTA2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMCA5_HUMAN | 2.59 | -2.46 | 1.00 | n/a | No Hit | |||
| MTA2_HUMAN | 2.49 | -2.03 | 1.00 | n/a | n/a |
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