rs6420728 chr6:122692187 T>C

Sequence
cttgcccaaggcccgctgtaacca[T/C]cccctgtctatagcctatgtttgc
ASB in cell types
MCF7 WS8 cells
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
MCF7 WS8 cells 1.08 -0.32 0.021.00 1.50
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Motif analysis

No data available

Genetic associations

GRASP adiponectin levels,  hdl cholesterol,  obesity with early age of onset (age >2)
GTEx eQTL Adipose_Subcutaneous,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Lung,  Nerve_Tibial,  Thyroid,  Whole_Blood

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