rs6426252 chr1:247476585 G>T

Sequence
cctgcctttggtttcacttccttg[G/T]ttttttcttaaaacaggtactgag
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF1_HUMAN BHE40_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN -3.88 1.97 1.006.1·10-3 2.00 n/a No Hit
BHE40_HUMAN n/a 2.57 1.000.02 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Nerve_Tibial Thyroid Whole_Blood

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