ADASTRA v5.1.3
Search
Browse
Annotate
Help
Downloads
About
rs6427361
chr1:157240516
A
>
G
Sequence
atgggctagcagctgtgagactgc[A/G]gggtgagcctcaagcttgtcctta
ASB in cell types
SET2 (Adult acute megakaryoblastic leukemia, Homo Sapiens)
ASB for transcription factors
STAT1_HUMAN
RBM25_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN
1.74
-0.83
6.2·10
-3
1.00
1.00
n/a
No Hit
RBM25_HUMAN
-1.25
1.81
1.00
0.02
2.00
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
hdl cholesterol change with statins
,
triglycerides
GTEx eQTL
Liver
,
Lung
Download
Download page in JSON
Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)