rs6427375 chr1:157400002 A>G
- Sequence
tgctcctccctcaggctaatggga[A/G]ggggagttcttaaatgtcctggag
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- IKZF1_HUMAN COT1_HUMAN IKZF2_HUMAN RELB_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 2.34 | -2.24 | 1.25 | n/a | No Hit | |||
| COT1_HUMAN | 3.10 | -2.84 | 1.00 | n/a | No Hit | |||
| IKZF2_HUMAN | 2.42 | -0.42 | 2.00 | n/a | n/a | |||
| RELB_HUMAN | 2.46 | -2.49 | 1.00 | n/a | No Hit |
Items per page:
1 – 4 of 4