rs6427628 chr1:161765607 T>A

Sequence
agttggagttcgtgatgtatgtga[T/A]tttcctttaaataaaacccgaatc
ASB in cell types
22RV1 (prostate carcinoma)

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
22RV1 (prostate carcinoma) -2.21 3.00 1.000.02 2.00
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration advanced age-related macular degeneration (geographic atrophy)
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Cells_Cultured_fibroblasts Esophagus_Mucosa Skin_Sun_Exposed_Lower_leg Whole_Blood

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