rs6428114 chr1:192604800 G>T
- Sequence
ttatttatttagtttatttattta[G/T]ttagttagtttatctgtatttact
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN MEF2B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 2.07 | -0.72 | 1.56 | -1.26 | Weak Concordant | |||
| MEF2B_HUMAN | n/a | 2.40 | 1.00 | n/a | No Hit |
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Motif analysis
