rs6429213 chr1:235642088 T>C
- Sequence
aacgtacagtgcggaaaagcaaca[T/C]aacacactaagaaccgtgcggaaa
- ASB in cell types
- BEAS-2B (bronchial epithelium) CTV-1 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- GCR_HUMAN ETS1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 1.23 | -0.39 | 1.00 | n/a | No Hit | |||
| ETS1_HUMAN | -1.08 | 1.79 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Breast_Mammary_Tissue, Colon_Transverse, Small_Intestine_Terminal_Ileum