rs6429722 chr1:15171231 T>C

Sequence
tgatttggggccacgcctggaaga[T/C]cgctgtttgagatcaaaaggtttg
ASB for transcription factors
ATF3_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ATF3_HUMAN 1.87 -1.64 0.021.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP obesity with early age of onset (age >2),  rheumatoid arthritis,  waist hip ratio
GTEx eQTL Adrenal_Gland,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Colon_Sigmoid,  Colon_Transverse,  Esophagus_Muscularis,  Lung,  Nerve_Tibial,  Pituitary,  Prostate,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Small_Intestine_Terminal_Ileum,  Thyroid

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