rs6430425 chr2:133519909 C>T
- Sequence
ggtggtgccaaagtgccaagcggc[C/T]gggcacggtggctcacacctgtca
- ASB in cell types
- HCT-116 (colon carcinoma) GM02255 (Lymphoblastoid Cell Lines) GM19239 (male B-cells lymphoblastoid cell line) 2588 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- STAG1_HUMAN RAD21_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 1.16 | 0.38 | 1.14 | n/a | n/a | |||
| RAD21_HUMAN | 0.56 | 1.77 | 1.33 | n/a | n/a |
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