rs6431564 chr2:237905305 A>G
- Sequence
atcctcactgacggagctcacaac[A/G]tttattgaaagtttcagctgtcac
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) gastroesophageal sphincter HASM2 (Human airway smooth muscle 2)
- ASB for transcription factors
- EP300_HUMAN MEF2B_HUMAN PKNX1_HUMAN TBX21_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EP300_HUMAN | -0.12 | 1.80 | 1.28 | n/a | n/a | |||
| MEF2B_HUMAN | -0.95 | 2.00 | 1.50 | n/a | No Hit | |||
| PKNX1_HUMAN | -1.93 | 2.29 | 1.00 | n/a | No Hit | |||
| TBX21_HUMAN | -1.73 | 2.03 | 1.00 | n/a | No Hit | |||
| SKIL_HUMAN | -2.64 | 2.86 | 1.00 | n/a | n/a |
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