rs643318 chr11:67582985 C>G

Sequence
ctatgtaacaaacctgcacatcct[C/G]tacatgtaccccagaacttcaaat
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) GM17942 (lymphoblastoid cell)
ASB for transcription factors
FOXK2_HUMAN CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXK2_HUMAN -3.38 3.23 1.002.0·10-4 1.00 n/a n/a
CTCF_HUMAN -0.29 1.76 1.000.04 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Tibial Heart_Left_Ventricle Skin_Sun_Exposed_Lower_leg

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