rs6433881 chr2:181037264 A>G
- Sequence
gttcctggtttatgtatttactgt[A/G]ctttttattgttattttagagtgt
- ASB in cell types
- 22RV1 (prostate carcinoma) endometrial stromal cells
- ASB for transcription factors
- SP7_HUMAN PRGR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SP7_HUMAN | -2.08 | 2.45 | 1.00 | n/a | n/a | |||
| PRGR_HUMAN | 1.72 | -0.98 | 1.00 | -0.56 | Weak Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Artery_Tibial, Brain_Cerebellum, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Whole_Blood