rs6434222 chr2:187547517 T>A
- Sequence
ttggttcaagagaggaactacagc[T/A]gttggtgactacaaccatctgccc
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney) MOLM14 (Adult acute myeloid leukemia) MDM(monocyte derived macrophages)
- ASB for transcription factors
- TAF9B_HUMAN CDK8_HUMAN ZN318_HUMAN HDAC1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TAF9B_HUMAN | 4.29 | n/a | 1.00 | n/a | n/a | |||
| CDK8_HUMAN | 2.79 | -2.55 | 1.00 | n/a | n/a | |||
| ZN318_HUMAN | 3.19 | -0.31 | 1.00 | n/a | n/a | |||
| HDAC1_HUMAN | 1.73 | -0.83 | 1.00 | n/a | n/a | |||
| MTA2_HUMAN | 2.24 | -0.45 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Aorta, Artery_Coronary, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Ovary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Stomach, Testis