rs6435689 chr2:212110339 T>C

Sequence
ccccagtatatttattgcttactc[T/C]tcttctcttccaagacttgacttc
ASB in cell types
HUVEC-C (HUVEC, umbilical vein endothelial cells)
ASB for transcription factors
TF65_HUMAN SUH_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TF65_HUMAN -4.65 3.12 1.009.3·10-5 2.00 n/a No Hit
SUH_HUMAN -5.13 3.05 1.001.0·10-2 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration advanced age-related macular degeneration (choroidal neovascularization) vs. no amd ldl cholesterol sporadic creutzfeldt-jakob disease total cholesterol transmission distortion
GTEx eQTL Skin_Not_Sun_Exposed_Suprapubic

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