rs6437394 chr3:194633785 A>G
- Sequence
gcagtaaaaagggtggggtgcaag[A/G]ccaggaaggaggaaacaaacgtgc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) HepG2 (hepatoblastoma) CTV-1 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- ELF1_HUMAN TBX3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ELF1_HUMAN | 2.72 | -2.38 | 1.00 | -1.88 | Weak Concordant | |||
| TBX3_HUMAN | -0.40 | 2.00 | 1.00 | n/a | No Hit |
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Motif analysis
